PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19132
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 324aa    MW: 37066.8 Da    PI: 6.3463
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19132genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-19113163155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++  +g+WvAeIr p+    r  r +lg+++ta++Aa a+++a+++++g
  PEQU_19132 113 CKYRGVRQRT-WGKWVAEIRQPK----RgSRLWLGTYDTAFDAALAYDEAARAMYG 163
                 79*****999.**********83....46************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.59E-30113169No hitNo description
PfamPF008471.4E-13113163IPR001471AP2/ERF domain
SMARTSM003802.0E-32114177IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-29114171IPR001471AP2/ERF domain
PROSITE profilePS5103220.653114171IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-19114171IPR016177DNA-binding domain
PRINTSPR003671.7E-9115126IPR001471AP2/ERF domain
PRINTSPR003671.7E-9137153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MVLKAFSDTF GSHNTKYFFS LFELHRLFII FFFRPFDLLN SFYPLLFYYC SFRKKGIRKR  60
VSGTNCVAEI LAKWKYQNSE SHSLDTECTR KVPAKGSKKG CMRGKGGPEN SNCKYRGVRQ  120
RTWGKWVAEI RQPKRGSRLW LGTYDTAFDA ALAYDEAARA MYGSYARVNL SQFDSGGHGN  180
LQECSTCIQD EHINLSHCKK SKSETFDSTT TLDATLEADD LKPEAVKEIK PQPSCSEDHQ  240
TEEFMLAKEP IEKHDCLEEM PFDMFHVDEI LGFANGSHIP SSGSDFQCPS TGQEADTMFW  300
SLDQMDYGFP DLRFLDPIFF SELP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-18115170359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010922640.18e-58PREDICTED: dehydration-responsive element-binding protein 2B-like isoform X1
TrEMBLQ6T5214e-55Q6T521_FESAR; Dehydration-responsive element binding protein 2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73153551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.11e-33ERF family protein